The detailed information of tRNA gene sequence


Sequence ID>WENV170972162
Genome IDMTKX01021400
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 104
End posion on genome 178
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accagtttgc
tRNA gene sequence 
GACCCCTTCGTCTATTGGTTAGGACTCAAGATTTTCATTCTTGCAAGAGGGGTTCAATTC
CCCTAGGGGTCGCCA
Downstream region at tRNA end position 
atttataggg
Secondary structure (Cloverleaf model)
>WENV170972162	Glu	TTC
                   c      GCCA atttataggg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T T A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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