The detailed information of tRNA gene sequence


Sequence ID>WENV170972191
Genome IDMTKX01022437
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1181
End posion on genome 1106
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
attcggtggc
tRNA gene sequence 
GCCCACGTAGCTCAGTCGGCAGAGCACGTCCTTGGTAAGGACGAGGTCACCGGTTCGATC
CCGGTCGTGGGCTCCA
Downstream region at tRNA end position 
tgccttcagg
Secondary structure (Cloverleaf model)
>WENV170972191	Thr	GGT
                   c      TCCA tgccttcagg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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