The detailed information of tRNA gene sequence


Sequence ID>WENV170972195
Genome IDMTKX01022484
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 32062
End posion on genome 31987
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttcgccgt
tRNA gene sequence 
GGCGGATTCGTCTAGAGGCCTAGGATACCGCCCTCTCAAGGCAGAGACACGGGTTCGAAT
CCCGTATCCGCTACCA
Downstream region at tRNA end position 
ccacggtaag
Secondary structure (Cloverleaf model)
>WENV170972195	Glu	CTC
                   t      ACCA ccacggtaag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGAC
                    C - G
                    C   A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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