The detailed information of tRNA gene sequence


Sequence ID>WENV170972200
Genome IDMTKX01022530
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 784
End posion on genome 709
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagtaatttt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCCTCCTTGGCGTGGAGGAGGCCAGGGGTTCAACT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
gtataataaa
Secondary structure (Cloverleaf model)
>WENV170972200	Ala	GGC
                   t      ACCA gtataataaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       G
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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