The detailed information of tRNA gene sequence


Sequence ID>WENV170972205
Genome IDMTKX01022735
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2797
End posion on genome 2871
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcacatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACAA
Downstream region at tRNA end position 
agaaaaannn
Secondary structure (Cloverleaf model)
>WENV170972205	Met	CAT
                   t      ACAA agaaaaannn
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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