The detailed information of tRNA gene sequence


Sequence ID>WENV170972207
Genome IDMTKX01022847
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11033
End posion on genome 11108
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caaatggttt
tRNA gene sequence 
CGGGGCGTAGCGCAGATCGGCTAGCGCGCACGGTTCGGGTCCGTGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACtg
Downstream region at tRNA end position 
ttaccaagca
Secondary structure (Cloverleaf model)
>WENV170972207	Pro	CGG
                   t      ACtg ttaccaagca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T A G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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