The detailed information of tRNA gene sequence


Sequence ID>WENV170972210
Genome IDMTKX01022977
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3729
End posion on genome 3804
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acccgtgaga
tRNA gene sequence 
GGGCCCATAGCTCAATTGGTAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGATT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
gattttatgg
Secondary structure (Cloverleaf model)
>WENV170972210	Met	CAT
                   a      ACCA gattttatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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