The detailed information of tRNA gene sequence


Sequence ID>WENV170972220
Genome IDMTKX01023413
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2802
End posion on genome 2878
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttctaaat
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCAGTGGAATCATAATCCACGTGTCCGGGGTTCGAA
TCCCTGCACCGCTACCA
Downstream region at tRNA end position 
gcactaatcc
Secondary structure (Cloverleaf model)
>WENV170972220	Met	CAT
                   t      ACCA gcactaatcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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