The detailed information of tRNA gene sequence


Sequence ID>WENV170972222
Genome IDMTKX01023469
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 17510
End posion on genome 17420
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcggcatta
tRNA gene sequence 
GGAGAAGTACCCAAGAGGCCGAAGGGGAGGCTTTGCTAAAGCTTTAGGCGGGGCAACCTG
CGCGAGGGTTCGACTCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
taccccgtag
Secondary structure (Cloverleaf model)
>WENV170972222	Ser	GCT
                   a      GCCA taccccgtag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C T C C C     A
      A G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TAGGCGGGGCAACCTGCGC
                    A - T
                    G + T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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