The detailed information of tRNA gene sequence


Sequence ID>WENV170972223
Genome IDMTKX01023525
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1120
End posion on genome 1209
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagcgagtcc
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTCGATTGGGGCGGTCTCGAAAACCGTTGTCCGGGCAACTGGA
CCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
ctgacaatac
Secondary structure (Cloverleaf model)
>WENV170972223	Ser	CGA
                   c      GCAA ctgacaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGTCCGGGCAACTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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