The detailed information of tRNA gene sequence


Sequence ID>WENV170972231
Genome IDMTKX01023783
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1313
End posion on genome 1222
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tccgccctcG
tRNA gene sequence 
GGAGGGTGAAGGATCCGGTGATCCTTCCGGACTTCAAATCCGGTATGGGGCTATAAACGT
CCCGGATGGGTTCGACTCCCATACCTTCNNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170972231	SeC(p)	TCA
                   G      NNnn nnnnnnnnnn
                     G   N
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C C T        A      | | | | |     G
    G       A G G A       A T G G G     C
    G       | | | |                 T T
    T       T C C T
      G A          T     TATGGGGCTATAAACGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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