The detailed information of tRNA gene sequence


Sequence ID>WENV170972249
Genome IDMTKX01024666
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 634
End posion on genome 557
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cagttcgttc
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGTAGGTTCGA
GCCCTATCGCGCCCACCT
Downstream region at tRNA end position 
caaacatccc
Secondary structure (Cloverleaf model)
>WENV170972249	Val	CAC
                   c      ACCT caaacatccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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