The detailed information of tRNA gene sequence


Sequence ID>WENV170972256
Genome IDMTKX01025053
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 488
End posion on genome 563
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
caaaataacc
tRNA gene sequence 
GGGGATGTAGCTCAACTGGGAGAGCGCGGCGTTCGCAATGCCGAGGTCAGGGGTTCGAGC
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
agacatagtc
Secondary structure (Cloverleaf model)
>WENV170972256	Ala	CGC
                   c      ACCA agacatagtc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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