The detailed information of tRNA gene sequence


Sequence ID>WENV170972261
Genome IDMTKX01025424
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 195
End posion on genome 102
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgggcaccac
tRNA gene sequence 
GGAGAGGTGTCCGAGTTGGCTTAAGGAGCGCGACTGGAAACCGCGTGGGCGGGGACGACC
TGCCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcatccccgc
Secondary structure (Cloverleaf model)
>WENV170972261	Ser	GGA
                   c      GCCA gcatccccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  C         A G G A
    T T A          G     TGGGCGGGGACGACCTGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A   C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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