The detailed information of tRNA gene sequence


Sequence ID>WENV170972266
Genome IDMTKX01025518
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 348
End posion on genome 425
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaggcttgct
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGAAGGTTCGA
ATCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
tccgaaatcc
Secondary structure (Cloverleaf model)
>WENV170972266	Pro	TGG
                   t      ACCA tccgaaatcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G A A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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