The detailed information of tRNA gene sequence


Sequence ID>WENV170972268
Genome IDMTKX01025518
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 544
End posion on genome 620
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcggtaattt
tRNA gene sequence 
GCGCTTGTAGCTCAGTTGGATAGAGCAACGGACTTCTAATCCGTAGGTCGCGGGTTCGAA
TCCTGCCAAGCGCGCCA
Downstream region at tRNA end position 
tcgtcccttt
Secondary structure (Cloverleaf model)
>WENV170972268	Arg	TCT
                   t      GCCA tcgtcccttt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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