The detailed information of tRNA gene sequence


Sequence ID>WENV170972274
Genome IDMTKX01025626
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 902
End posion on genome 993
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctgaattca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCTGCAATCGCGG
GACCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
aaacggatta
Secondary structure (Cloverleaf model)
>WENV170972274	Ser	CGA
                   a      GCAA aaacggatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCTGCAATCGCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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