The detailed information of tRNA gene sequence


Sequence ID>WENV170972278
Genome IDMTKX01025790
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 772
End posion on genome 680
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatttttaga
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCAGCTGCCTGCTAAGCAGTTGTACTGCCAAAAGCG
GTACCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gattttagac
Secondary structure (Cloverleaf model)
>WENV170972278	Ser	GCT
                   a      GCCA gattttagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGTACTGCCAAAAGCGGTACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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