The detailed information of tRNA gene sequence


Sequence ID>WENV170972284
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 698128
End posion on genome 698218
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atccagtcac
tRNA gene sequence 
GGAGGGGTGGGTGAGCGGCCGAAGCCACCTGCCTGGAGAGCAGGTGCACCCCCAAAGGGT
GCCGTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gaaggacagc
Secondary structure (Cloverleaf model)
>WENV170972284	Ser	GGA
                   c      GCCA gaaggacagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T G G       G T G G G     C
    G         + | |                 T T
    C       A G C C
      C G A        A     TGCACCCCCAAAGGGTGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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