The detailed information of tRNA gene sequence


Sequence ID>WENV170972285
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 719598
End posion on genome 719684
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actcgggagc
tRNA gene sequence 
GGAGGGATGTCCGAACGGCAAGGAGCCGGTCTCGAAAACCGGTACGGCTGAAAGGCCTTC
GGGGTTCGAATCCCCGTCCCTCCGCCA
Downstream region at tRNA end position 
gaggcgcggc
Secondary structure (Cloverleaf model)
>WENV170972285	Ser	CGA
                   c      GCCA gaggcgcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
        A A        G      | | | | |     G
      C     G C C T       C G G G G     C
      G       | | |                 T T
      G     A G G A
        C A        G     TACGGCTGAAAGGCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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