The detailed information of tRNA gene sequence


Sequence ID>WENV170972297
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 498129
End posion on genome 498046
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctcagatcgc
tRNA gene sequence 
GCCGGGGTGGCGAAACTGGCAGACGCAGGGGACTTAAAATCCCCAGAGCGAAAGCTCGTG
CGGGTTCAAATCCCGCCCTCGGCAgaa
Downstream region at tRNA end position 
gcggggtgga
Secondary structure (Cloverleaf model)
>WENV170972297	Leu	TAA
                   c      Agaa gcggggtgga
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C A A        G      | | | | |     A
    T       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     AGAGCGAAAGCTCGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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