The detailed information of tRNA gene sequence


Sequence ID>WENV170972300
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 496345
End posion on genome 496269
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccgttagtcc
tRNA gene sequence 
GGGGGCGTAGCTCAGTTTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTCGGCGGTTCGAT
CCCGCTCGCCTCCACCA
Downstream region at tRNA end position 
ggccttcggg
Secondary structure (Cloverleaf model)
>WENV170972300	Ala	TGC
                   c      ACCA ggccttcggg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T C G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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