The detailed information of tRNA gene sequence


Sequence ID>WENV170972306
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 154750
End posion on genome 154673
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctgtgttcgt
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGACCAGAGCAGCGGCCTTCTAAGCCGCAGGCCGGGGGTTCGA
TTCCTCCCGGGCGCGCCA
Downstream region at tRNA end position 
cacgaacagt
Secondary structure (Cloverleaf model)
>WENV170972306	Arg	TCT
                   t      GCCA cacgaacagt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C C T C C     A
    T T G A        A      | | + | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  A         G A G C
    C C A          A     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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