The detailed information of tRNA gene sequence


Sequence ID>WENV170972309
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 106275
End posion on genome 106203
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgctacgca
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTAGAGCGCTCCCTTCACGGGGGAGAAGTCGGGGGTTCAAGT
CCTCCTCCGCCCAgtc
Downstream region at tRNA end position 
ccccctatgc
Secondary structure (Cloverleaf model)
>WENV170972309	Val	CAC
                   a      Agtc ccccctatgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       G
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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