The detailed information of tRNA gene sequence


Sequence ID>WENV170972314
Genome IDMTKX01025966
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16689
End posion on genome 16613
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gggctcgttg
tRNA gene sequence 
GGGTCCGTGGCTCAGGTGGTTAGAGCGCGCGCCTGATAAGCGCGAGGTCCCTGGTTCGAG
TCCAGGCGGGCCCACCA
Downstream region at tRNA end position 
gaggcggtga
Secondary structure (Cloverleaf model)
>WENV170972314	Ile	GAT
                   g      ACCA gaggcggtga
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     G G A C C     A
      G G A        G      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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