The detailed information of tRNA gene sequence


Sequence ID>WENV170972323
Genome IDMTKX01026289
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8813
End posion on genome 8726
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaatcc
tRNA gene sequence 
GGTGAGGTGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAGCCGTA
CCGGGGGTTCGAATCCCCCCCTCACCGCag
Downstream region at tRNA end position 
ttggattcat
Secondary structure (Cloverleaf model)
>WENV170972323	Ser	GCT
                   c      GCag ttggattcat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTAGCCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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