The detailed information of tRNA gene sequence


Sequence ID>WENV170972328
Genome IDMTKX01026433
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4485
End posion on genome 4411
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caggcaatgg
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGCCTGCAAAGCCTTTATACCACGGTTCGAATC
CGTGTGCCGCCTCCA
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>WENV170972328	Cys	GCA
                   g      TCCA tttttttgtc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G T G C C     A
        G A        A      | | | | |     G
      T     A C C G       C A C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATAC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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