The detailed information of tRNA gene sequence


Sequence ID>WENV170972332
Genome IDMTKX01026466
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2565
End posion on genome 2490
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gacacgcgag
tRNA gene sequence 
GCTGCTGTAGCTCAGGTGGTAGAGCACCTCCTTGGTAAGGAGGAGGTCCTGGGTTCAAAT
CCCAGCAGCAGCTCCA
Downstream region at tRNA end position 
tgtttcgagc
Secondary structure (Cloverleaf model)
>WENV170972332	Thr	GGT
                   g      TCCA tgtttcgagc
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G A C C C     A
      G G A        A      | | | | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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