The detailed information of tRNA gene sequence


Sequence ID>WENV170972343
Genome IDMTKX01026635
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39170
End posion on genome 39082
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccattcgccc
tRNA gene sequence 
GGAGGGGTAGCATAGCCGGCCTAATGCGCGCGTCTCGAAAACGCGTGAGCAGAAATGCTC
CGTGGGTTCGAATCCCACCCCCTCCGCCT
Downstream region at tRNA end position 
tcgtgcctgc
Secondary structure (Cloverleaf model)
>WENV170972343	Ser	CGA
                   c      GCCT tcgtgcctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  G         T A C G       G T G G G     C
  G         | | | |                 T T
  C         A T G C
    C T A          G     TGAGCAGAAATGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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