The detailed information of tRNA gene sequence


Sequence ID>WENV170972349
Genome IDMTKX01026842
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 551
End posion on genome 627
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgtggataa
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGATAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tattttcgca
Secondary structure (Cloverleaf model)
>WENV170972349	Trp	CCA
                   a      GCCA tattttcgca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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