The detailed information of tRNA gene sequence


Sequence ID>WENV170972352
Genome IDMTKX01026911
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4207
End posion on genome 4280
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gctatttaaT
tRNA gene sequence 
GGGGGTGTAGCTCAGAGGGAGAGCATCTCGTTCGCAACGAGAGGGTCGTGGGTTCGAATC
CCATCACCTCCATaa
Downstream region at tRNA end position 
tacttaaagt
Secondary structure (Cloverleaf model)
>WENV170972352	Ala	CGC
                   T      ATaa tacttaaagt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A C C C     A
        G A        A      + | | | |     G
      A     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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