The detailed information of tRNA gene sequence


Sequence ID>WENV170972356
Genome IDMTKX01026995
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5846
End posion on genome 5757
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgctattt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTTCTCGACTTATCGGG
ACGGGGGTTCAAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
atgaacgtgg
Secondary structure (Cloverleaf model)
>WENV170972356	Ser	TGA
                   t      GCAA atgaacgtgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTCTCGACTTATCGGGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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