The detailed information of tRNA gene sequence


Sequence ID>WENV170972360
Genome IDMTKX01027114
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3308
End posion on genome 3223
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGACCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCATGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGCtc
Downstream region at tRNA end position 
tcactttttt
Secondary structure (Cloverleaf model)
>WENV170972360	Ser	TGA
                   g      GCtc tcactttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      A G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCATGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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