The detailed information of tRNA gene sequence


Sequence ID>WENV170972361
Genome IDMTKX01027132
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3807
End posion on genome 3733
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggcacgtcc
tRNA gene sequence 
GGCGAGGTAGCTCAGTGGTAGAGCAGGGGACTCATAAGCCCTTGGTCGTGAGTTCAACCC
TCACCCTCGCCACCT
Downstream region at tRNA end position 
gaacaggtgc
Secondary structure (Cloverleaf model)
>WENV170972361	Met	CAT
                   c      ACCT gaacaggtgc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          C C
                    T     C A C T C     A
        G A        A      | | | | |     A
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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