The detailed information of tRNA gene sequence


Sequence ID>WENV170972367
Genome IDMTKX01027331
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5457
End posion on genome 5384
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgagcatac
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGCCGCTCTCCAAAAGCGGATGTTGTGGGTTCAATT
CCTGCCTGGCCTGCac
Downstream region at tRNA end position 
aaaacccagg
Secondary structure (Cloverleaf model)
>WENV170972367	Trp	CCA
                   c      GCac aaaacccagg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | + + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     ATGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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