The detailed information of tRNA gene sequence


Sequence ID>WENV170972378
Genome IDMTKX01027979
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 214
End posion on genome 138
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgagatacct
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGTGTTGGCCTCCGGAGCCAAAGGTCGTGCGTTCAAA
TCGCACCGGGCGCGCTA
Downstream region at tRNA end position 
ttaatatcaa
Secondary structure (Cloverleaf model)
>WENV170972378	Arg	CCG
                   t      GCTA ttaatatcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        A      | | | | |     A
    T       C T C G       G T G C G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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