The detailed information of tRNA gene sequence


Sequence ID>WENV170972387
Genome IDMTKX01028411
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2890
End posion on genome 2980
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatggattc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCACGCCTGGAAAGTGTGTGTACGCCGAAAGCGT
ACCAAGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
aaattaactt
Secondary structure (Cloverleaf model)
>WENV170972387	Ser	GGA
                   c      GCAA aaattaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTACGCCGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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