The detailed information of tRNA gene sequence


Sequence ID>WENV170972391
Genome IDMTKX01028821
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 173
End posion on genome 247
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
attcgccttt
tRNA gene sequence 
GGCCCACTAGCTCAATGGCAGAGCAGTTGACTCTTAATCAATTGGTTCGGGGTTCAAGTC
CCCGGTGGGTCACTA
Downstream region at tRNA end position 
aatatggcgg
Secondary structure (Cloverleaf model)
>WENV170972391	Lys	CTT
                   t      ACTA aatatggcgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G          T G
                    T     G C C C C     A
        A A        A      | | | | |     A
      T     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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