The detailed information of tRNA gene sequence


Sequence ID>WENV170972392
Genome IDMTKX01028825
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 480
End posion on genome 565
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ccgtcatact
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGCAGACACGCCATCTTGAGGGGGTGGTGGGTAACTCCCGTCC
GGGTTCAAATCCCGGCTTCGGCACCA
Downstream region at tRNA end position 
actgaactta
Secondary structure (Cloverleaf model)
>WENV170972392	Leu	GAG
                   t      ACCA actgaactta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       C C G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGGGTAACTCCCGT
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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