The detailed information of tRNA gene sequence


Sequence ID>WENV170972400
Genome IDMTKX01029124
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 21072
End posion on genome 21148
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atagatggac
tRNA gene sequence 
GGGGTTGTAGCTCAGTCGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCAGCCCCGCCA
Downstream region at tRNA end position 
aattccttga
Secondary structure (Cloverleaf model)
>WENV170972400	Asp	GTC
                   c      GCCA aattccttga
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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