The detailed information of tRNA gene sequence


Sequence ID>WENV170972409
Genome IDMTKX01029396
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 121389
End posion on genome 121460
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taagtaattt
tRNA gene sequence 
GGCGGCGTACCCAAGTGGAAAGGGAGAGGTCTGCAAAACCTTTATGCAGCGGTTCAAATC
CGCTCGCCGCCTtaa
Downstream region at tRNA end position 
taaaagtatt
Secondary structure (Cloverleaf model)
>WENV170972409	Cys	GCA
                   t      Ttaa taaaagtatt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        A      | | | | |     A
      T     A C C C       A G C G G     C
      G       | | |                 T T
      G     A G G G
        A A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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