The detailed information of tRNA gene sequence


Sequence ID>WENV170972412
Genome IDMTKX01029396
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 122112
End posion on genome 122189
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgctataaC
tRNA gene sequence 
GGGGCCGTCGATTAGTCCGGTTTAAGTCCCTTGACTGTCGATCAAGTGACCGTGGGTTCA
AATCCCATCGGCCCCGTag
Downstream region at tRNA end position 
tcttctttat
Secondary structure (Cloverleaf model)
>WENV170972412	Asp	GTC
                   C      GTag tcttctttat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C T G A        C      + | | | |     A
  C         T T A G       G T G G G     C
  G         | + | |                 T T
  G         A G T C
    T T T A        C     TGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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