The detailed information of tRNA gene sequence


Sequence ID>WENV170972421
Genome IDMTKX01029437
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2303
End posion on genome 2228
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gtcaggattt
tRNA gene sequence 
GGGCCATTAGCTCAACAGGCAGAGCAACTGACTCTTAATCAGTAGGTTCCCCGTTCGATC
CGGGGATGGCCCACCA
Downstream region at tRNA end position 
aggagagcca
Secondary structure (Cloverleaf model)
>WENV170972421	Lys	CTT
                   t      ACCA aggagagcca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          C T
                    T     G G G G C     A
      C A A        A      | | | | |     G
    A       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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