The detailed information of tRNA gene sequence


Sequence ID>WENV170972425
Genome IDMTKX01029593
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2645
End posion on genome 2550
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttcactctt
tRNA gene sequence 
GGGGGTGGTTGAGTCCTGGTGGGCTCCGCGGTCTTCAAAACCGTCTGAGGGGTGCTTAAA
AGCGGCCCTGGTGGGTTCGACTCCCATCCACTCCCGttc
Downstream region at tRNA end position 
cttcgcaatg
Secondary structure (Cloverleaf model)
>WENV170972425	SeC(p)	TCA
                   t      Gttc cttcgcaatg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      T C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     CTGAGGGGTGCTTAAAAGCGGCCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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