The detailed information of tRNA gene sequence


Sequence ID>WENV170972427
Genome IDMTKX01029676
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1347
End posion on genome 1262
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgacggtaac
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCTATGGCGGCGGTCTTGAAAACCGTTGGGCGAAAGTCTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gaaaagttcg
Secondary structure (Cloverleaf model)
>WENV170972427	Ser	TGA
                   c      GCCA gaaaagttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TGGGCGAAAGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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