The detailed information of tRNA gene sequence


Sequence ID>WENV170972434
Genome IDMTKX01029894
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 42
End posion on genome 131
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttcctgttT
tRNA gene sequence 
GGAGAGATGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTATAGGTCTCGTACCT
ATCGTGGGTTCGAATCCCACTCTCTCCGTtg
Downstream region at tRNA end position 
atttctttaa
Secondary structure (Cloverleaf model)
>WENV170972434	Ser	CGA
                   T      GTtg atttctttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TATAGGTCTCGTACCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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