The detailed information of tRNA gene sequence


Sequence ID>WENV170972442
Genome IDMTKX01030115
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 839
End posion on genome 763
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgattggcac
tRNA gene sequence 
GGGGTCGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGTGGGTTCGAG
CCCCATCGACCCCGCCA
Downstream region at tRNA end position 
gatacgagaa
Secondary structure (Cloverleaf model)
>WENV170972442	Asp	GTC
                   c      GCCA gatacgagaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G T G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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