The detailed information of tRNA gene sequence


Sequence ID>WENV170972453
Genome IDMTKX01030632
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5605
End posion on genome 5679
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaatcattt
tRNA gene sequence 
GGGGTATTAGCTCAGTTGGCTAGAGCACCAGTATCGCACACTGGAGGTCATCGGTTCAAA
TCCGATATACTCCACtc
Downstream region at tRNA end position 
atattatggt
Secondary structure (Cloverleaf model)
>WENV170972453	Ala	CGC
                   t      ACtc atattatggt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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