The detailed information of tRNA gene sequence


Sequence ID>WENV170972460
Genome IDMTKX01030950
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 190
End posion on genome 116
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agacggtctT
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGTAGAGCGCCGGTCTCCAAAACCGGACGTTGTGGGTTCGAGT
CCTACCTGGCCTGGta
Downstream region at tRNA end position 
gcaaaataac
Secondary structure (Cloverleaf model)
>WENV170972460	Trp	CCA
                   T      GGta gcaaaataac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      A A T        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ACGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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