The detailed information of tRNA gene sequence


Sequence ID>WENV170972464
Genome IDMTKX01031081
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2145
End posion on genome 2235
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtttcccaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGGCGGCCTCGAAAGCCGTTGTGCGGTTTTACCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttattctctt
Secondary structure (Cloverleaf model)
>WENV170972464	Ser	CGA
                   a      GCCA ttattctctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCGGTTTTACCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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